Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008993.1 Hibiscus syriacus cultivar Beakdansim tig00112369_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51225

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6344--6426
31
2.9
28
78
10
87
39
12
9
38
1.75
6352--6426
28
2.5
30
79
10
75
42
13
9
34
1.76
10718--10747
2
15.0
2
100
0
60
50
0
0
50
1.00
12687--12751
21
3.1
21
86
0
85
21
16
32
29
1.96
19552--19593
22
1.9
22
100
0
84
40
26
9
23
1.85
20069--20127
29
2.0
29
100
0
118
23
13
13
49
1.78
24752--24810
29
2.0
29
100
0
118
23
13
13
49
1.78
27639--27674
18
2.0
18
88
0
54
19
36
19
25
1.95
33571--33625
29
2.0
27
89
7
83
49
5
0
45
1.25
33598--33647
22
2.3
22
89
0
82
46
4
2
48
1.32
33571--33668
28
3.6
28
71
20
77
45
5
2
46
1.36
33630--33710
42
2.0
40
86
13
114
40
7
2
49
1.44
33714--33754
17
2.4
17
91
0
64
46
9
0
43
1.36
38028--38054
14
1.9
14
100
0
54
40
0
0
59
0.98
40631--40671
21
2.0
21
95
0
73
41
17
0
41
1.49
48802--48894
3
30.3
3
89
4
141
37
0
0
62
0.96

Tables:   1

The End!