Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008997.1 Hibiscus syriacus cultivar Beakdansim tig00112373_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39321

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1276--1317
17
2.5
17
84
0
57
42
11
14
30
1.81
2278--2310
15
2.1
16
94
5
59
12
24
3
60
1.46
10627--10660
14
2.4
14
90
9
52
0
17
2
79
0.86
15769--15810
19
2.2
19
86
4
57
50
7
9
33
1.62
20012--20041
13
2.4
13
94
5
53
26
30
0
43
1.55
23157--23275
35
3.4
35
83
2
148
28
35
4
31
1.76
27691--27830
36
3.8
38
86
5
182
28
36
2
32
1.69
27736--27793
13
4.7
13
72
12
50
29
39
1
29
1.67
27691--27840
35
4.2
36
88
4
180
29
36
2
32
1.72
37091--37122
9
3.7
9
95
4
57
0
18
0
81
0.70
37090--37122
13
2.5
13
86
13
50
0
21
0
78
0.75
37125--37169
22
2.0
22
82
0
54
11
15
17
55
1.68
39151--39188
18
2.1
19
95
5
69
34
15
18
31
1.92

Tables:   1

The End!