Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008998.1 Hibiscus syriacus cultivar Beakdansim tig00112374_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69212

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9458--9499
19
2.2
19
86
4
57
50
7
9
33
1.62
13654--13682
12
2.5
12
94
5
51
27
34
0
37
1.57
16782--16900
35
3.4
35
83
2
148
29
35
4
31
1.77
21301--21440
36
3.8
38
86
5
182
28
36
2
32
1.69
21346--21403
13
4.7
13
72
12
50
29
39
1
29
1.67
21301--21450
35
4.2
36
88
4
180
29
36
2
32
1.72
25474--25503
13
2.4
13
94
5
53
43
0
30
26
1.55
30966--31019
23
2.2
25
83
6
67
7
18
14
59
1.58
33741--33780
19
2.1
19
86
9
55
2
20
0
77
0.88
33768--33821
23
2.2
25
83
6
67
7
18
14
59
1.58
37239--37268
13
2.4
13
94
5
53
43
0
30
26
1.55
39990--40028
19
2.1
19
90
4
62
58
15
15
10
1.62
42788--42817
13
2.4
13
94
5
53
43
0
30
26
1.55
46772--46805
5
7.2
5
90
9
54
0
17
0
82
0.67
46772--46812
14
2.8
15
85
10
50
0
21
0
78
0.76
46800--46853
23
2.2
25
83
6
67
7
18
14
59
1.58
60738--60779
19
2.1
21
86
8
61
0
11
4
83
0.79
61193--61229
14
2.7
14
91
4
58
32
0
43
24
1.55
61568--61608
19
2.1
19
86
4
55
51
7
7
34
1.58
62913--62952
21
1.9
21
94
0
71
82
7
7
2
0.92

Tables:   1

The End!