Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009002.1 Hibiscus syriacus cultivar Beakdansim tig00112384_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64674

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4463--4506
18
2.4
18
85
7
54
40
18
20
20
1.91
7365--7541
60
3.0
60
82
5
209
34
20
3
40
1.71
13599--13630
2
16.0
2
100
0
64
50
0
0
50
1.00
19056--19233
94
1.9
94
94
0
311
21
20
15
42
1.88
21497--21530
16
2.2
16
94
5
61
20
11
5
61
1.50
22127--22232
20
5.2
21
69
5
83
19
19
24
35
1.95
22123--22232
41
2.7
41
95
1
195
20
20
23
36
1.95
22411--22659
41
6.0
41
92
1
392
37
23
20
18
1.94
23890--23938
20
2.5
20
86
6
64
40
2
4
53
1.32
23952--24007
29
2.0
28
86
10
78
50
0
5
44
1.25
23909--24003
21
4.5
21
74
11
88
44
0
6
49
1.27
25399--25428
15
1.9
16
93
6
53
63
0
0
36
0.95
28485--28545
3
20.7
3
93
3
106
0
29
0
70
0.88
32927--32958
16
2.0
16
93
0
55
34
6
25
34
1.81
37443--37883
215
2.0
218
82
1
537
29
17
17
35
1.93
40726--40766
21
1.9
22
90
5
66
39
19
17
24
1.92
41932--41979
20
2.4
20
82
6
53
47
4
14
33
1.63
52819--52871
26
2.0
26
100
0
106
22
18
28
30
1.98
58433--58482
23
2.2
23
100
0
100
22
10
24
44
1.83
59441--59502
28
2.2
29
94
2
108
59
4
16
19
1.54
61593--61654
32
1.9
32
93
0
106
29
8
22
40
1.82

Tables:   1

The End!