Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009003.1 Hibiscus syriacus cultivar Beakdansim tig00112386_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71150

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7626--7701
36
2.1
36
85
7
100
47
1
3
47
1.29
7846--7883
20
1.9
20
88
0
58
21
26
10
42
1.85
9065--9131
23
2.9
22
82
8
80
28
26
22
22
1.99
9147--9364
103
2.1
103
95
0
391
37
23
12
26
1.91
9732--9947
107
2.0
107
100
0
432
37
23
0
38
1.61
10257--10413
64
2.5
64
76
9
158
26
19
21
33
1.96
13555--14692
586
1.9
586
95
0
2051
24
15
26
33
1.95
22229--22256
12
2.3
12
100
0
56
46
7
7
39
1.59
24857--24884
2
14.0
2
100
0
56
50
0
0
50
1.00
25496--25540
22
2.0
24
91
8
76
46
0
2
51
1.13
25588--25842
140
1.8
141
88
5
394
50
7
11
30
1.65
34234--34405
88
1.9
90
89
6
271
25
22
12
40
1.88
48240--48372
34
3.9
34
92
0
185
25
7
21
45
1.78
54909--54949
20
2.0
20
85
0
55
26
0
4
68
1.10
60075--60296
30
7.4
30
77
6
209
41
11
25
21
1.86
61846--61911
18
3.9
17
72
12
57
30
0
4
65
1.13
61850--61921
34
2.1
36
89
10
114
29
0
4
66
1.10
61858--61923
18
3.6
18
71
21
57
27
0
4
68
1.09
61873--61925
11
4.7
11
75
11
54
26
0
1
71
0.96
63897--64002
30
3.6
28
72
8
86
44
8
30
16
1.78
66609--67291
138
5.0
137
86
3
874
32
16
22
28
1.96
70335--70403
30
2.4
30
78
4
79
49
4
13
33
1.61

Tables:   1

The End!