Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009005.1 Hibiscus syriacus cultivar Beakdansim tig00112389_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39416

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
755--808
19
3.0
18
81
15
67
81
1
16
0
0.78
761--808
16
3.1
16
85
8
55
81
2
16
0
0.79
755--799
8
5.2
8
84
10
54
82
2
15
0
0.77
755--808
15
3.5
15
76
18
58
81
1
16
0
0.78
20589--20628
8
4.9
8
84
3
53
0
15
0
85
0.61
20593--20648
23
2.4
24
79
8
71
1
16
1
80
0.88
20592--20648
8
6.6
9
76
23
52
1
15
1
80
0.87
28499--28526
8
3.5
8
100
0
56
0
10
0
89
0.49
28481--28528
11
4.4
11
78
7
53
0
16
0
83
0.65
28481--28528
16
3.0
17
79
14
57
0
16
0
83
0.65
28484--28546
20
3.0
21
77
11
65
1
15
1
80
0.86
28487--28528
20
2.0
21
90
4
68
0
14
0
85
0.59
30794--30839
20
2.3
20
92
3
76
34
10
6
47
1.64
35472--35500
2
14.5
2
100
0
58
51
0
0
48
1.00
38080--38165
41
2.1
41
95
4
156
13
27
22
36
1.92

Tables:   1

The End!