Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009025.1 Hibiscus syriacus cultivar Beakdansim tig00112422_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95271

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22230--22264
16
2.1
17
94
5
63
31
8
25
34
1.86
23014--23046
15
2.1
16
88
5
50
51
15
24
9
1.72
34813--34857
22
2.0
23
83
12
58
31
0
6
62
1.21
37882--37906
2
12.5
2
100
0
50
48
0
0
52
1.00
49412--49451
12
3.2
12
93
6
71
15
55
15
15
1.71
49411--49451
13
3.2
13
93
6
75
14
56
14
14
1.69
52713--52744
15
2.1
16
94
5
57
6
25
18
50
1.70
53495--53526
16
2.0
16
93
0
55
34
25
6
34
1.81
53924--53969
13
3.5
13
96
3
83
17
52
17
13
1.75
55533--55567
2
17.5
2
100
0
70
48
0
0
51
1.00
72727--72792
33
2.0
33
87
0
96
24
45
1
28
1.62
72830--72870
21
1.9
22
90
5
66
19
24
14
41
1.89
74872--74924
24
2.2
24
83
6
63
26
7
13
52
1.66
75067--75104
20
1.9
20
94
0
67
18
15
10
55
1.68
76311--76354
21
2.0
22
83
12
56
31
0
6
61
1.22
79382--79420
2
20.5
2
89
10
64
48
0
0
51
1.00
79382--79420
9
4.1
10
87
12
64
48
0
0
51
1.00
80056--80238
30
6.0
31
88
5
268
38
21
18
21
1.94
80069--80238
91
1.9
92
90
3
272
38
21
18
21
1.93
80056--80238
61
3.0
62
90
5
277
38
21
18
21
1.94
80416--80462
23
2.0
24
91
4
78
34
21
0
44
1.52
81092--81136
21
2.1
21
87
0
63
15
24
28
31
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84174--84356
31
6.0
31
90
3
277
37
21
20
20
1.95
84187--84356
89
1.9
90
92
2
288
37
21
20
20
1.94
85194--85238
21
2.1
21
87
0
63
15
24
28
31
1.96
86282--86311
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!