Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009026.1 Hibiscus syriacus cultivar Beakdansim tig00112423_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71164

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2400--2431
15
2.1
16
94
5
57
6
25
18
50
1.70
3182--3213
16
2.0
16
93
0
55
34
25
6
34
1.81
3611--3656
13
3.5
13
96
3
83
17
52
17
13
1.75
5220--5254
2
17.5
2
100
0
70
48
0
0
51
1.00
22444--22509
33
2.0
33
87
0
96
24
45
1
28
1.62
24605--24657
24
2.2
24
83
6
63
26
7
13
52
1.66
24967--25012
20
2.3
20
89
10
76
17
17
10
54
1.70
26059--26103
22
2.0
23
83
12
58
31
0
6
62
1.21
29142--29180
2
19.5
2
100
0
78
48
0
0
51
1.00
29823--30009
31
6.0
31
92
1
304
37
21
19
21
1.94
30187--30233
23
2.0
24
91
4
78
34
21
0
44
1.52
30866--30910
21
2.1
21
87
0
63
15
24
28
31
1.96
33970--34156
31
6.0
31
93
1
313
37
21
19
21
1.95
35013--35057
21
2.1
21
87
0
63
15
24
28
31
1.96
36109--36143
2
18.5
2
88
11
56
48
0
0
51
1.00
46078--46123
13
3.5
13
96
3
83
17
52
17
13
1.75
47686--47724
2
19.5
2
100
0
78
48
0
0
51
1.00
64997--65082
43
2.0
43
93
4
147
36
25
12
25
1.92
67282--67361
41
2.0
41
82
0
97
31
22
18
27
1.97

Tables:   1

The End!