Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009049.1 Hibiscus syriacus cultivar Beakdansim tig00112460_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58721

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4410--4455
16
2.7
18
86
13
78
54
6
28
10
1.60
6135--6169
18
1.9
18
94
0
61
37
20
25
17
1.94
6258--6298
21
1.9
22
85
14
59
39
14
19
26
1.90
9630--10268
151
4.2
152
95
1
1135
34
21
20
23
1.97
9630--10268
226
2.8
227
95
1
1158
34
21
20
23
1.97
9630--10268
75
8.5
76
95
1
1137
34
21
20
23
1.97
10940--10988
20
2.4
21
93
3
82
38
16
8
36
1.78
11354--11463
54
2.0
54
89
0
166
24
22
16
36
1.94
22305--22342
2
19.0
2
100
0
76
50
0
0
50
1.00
27562--27587
11
2.4
11
100
0
52
7
0
0
92
0.39
28872--29031
78
2.0
79
90
3
252
50
12
3
33
1.56
31171--31263
49
1.9
48
86
6
134
50
1
1
47
1.15
31248--31288
21
2.0
20
90
4
64
43
0
2
53
1.13
31376--31400
13
1.9
13
100
0
50
44
0
0
56
0.99
33887--33929
17
2.5
17
92
0
77
13
23
46
16
1.83
34608--35294
55
12.6
55
88
1
945
28
27
14
28
1.96
39842--39869
8
3.5
8
100
0
56
50
10
0
39
1.37
49460--49502
17
2.5
17
92
0
77
13
23
46
16
1.83
51156--51205
15
3.3
15
94
0
82
8
64
18
10
1.48
52111--52215
36
2.9
36
83
8
133
33
14
14
38
1.86
54198--54235
20
1.9
20
88
0
58
18
18
34
28
1.95

Tables:   1

The End!