Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009052.1 Hibiscus syriacus cultivar Beakdansim tig00112466_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35513

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1390--1911
181
2.9
182
92
3
829
33
16
14
36
1.89
3339--3425
3
29.0
3
77
0
84
24
34
5
35
1.79
3339--3440
18
5.7
18
79
0
87
22
34
6
36
1.81
3347--3437
42
2.2
42
91
0
146
21
35
7
35
1.83
4888--6569
198
8.5
198
97
1
3145
31
16
15
36
1.90
6716--6764
19
2.6
19
93
0
80
57
10
2
30
1.43
8553--8618
33
2.0
33
87
0
96
24
45
1
28
1.62
10917--10962
19
2.4
19
79
13
58
19
17
10
52
1.74
11084--11132
20
2.5
20
81
15
66
16
14
14
55
1.70
11194--11641
228
2.0
228
95
0
799
39
7
8
45
1.62
12164--12228
28
2.3
29
78
10
71
46
7
6
40
1.58
14967--15038
2
36.5
2
97
2
137
50
0
0
50
1.00
17748--17805
28
2.1
28
90
6
91
5
51
32
10
1.58
19368--19473
43
2.5
43
85
1
151
33
19
19
27
1.96
19623--19740
43
2.8
42
80
6
112
30
17
22
28
1.97
19668--19768
43
2.4
44
83
6
127
25
18
24
30
1.98
19937--20071
43
3.1
42
84
2
171
35
20
22
22
1.96
20194--20250
26
2.2
26
96
0
105
50
17
10
21
1.75
22752--22790
19
1.9
19
90
10
60
51
0
38
10
1.36
23134--23292
52
3.1
52
96
0
300
42
15
8
33
1.77
24355--24449
42
2.3
42
90
0
145
29
24
14
31
1.95
24723--25132
43
9.7
42
86
3
484
33
20
20
25
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24723--25132
85
4.8
85
83
6
476
33
20
20
25
1.97
24723--25132
126
3.2
127
85
4
533
33
20
20
25
1.97
29214--29410
84
2.4
83
78
6
213
31
18
19
30
1.95
29302--29489
80
2.3
80
81
7
218
35
18
14
31
1.91

Tables:   1

The End!