Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009063.1 Hibiscus syriacus cultivar Beakdansim tig00112486_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79026

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1545--1581
14
2.5
15
91
8
58
24
0
2
72
0.97
12102--12171
12
5.9
12
78
8
72
84
0
14
1
0.70
12102--12172
24
2.8
26
85
12
94
83
0
15
1
0.73
13110--13560
52
8.8
52
95
1
777
24
14
23
37
1.92
14194--14644
119
3.8
118
95
2
777
38
13
20
27
1.91
14893--14973
3
27.0
3
82
0
90
32
3
0
64
1.11
14884--14959
12
6.3
12
82
8
75
32
6
0
60
1.22
16369--16413
22
2.2
20
84
8
54
37
2
4
55
1.32
17493--17531
16
2.3
18
91
8
64
48
0
0
51
1.00
17503--17539
16
2.2
16
90
4
56
43
0
2
54
1.14
17550--17831
139
2.0
139
85
8
383
47
7
7
37
1.58
17862--17923
25
2.7
24
79
16
69
62
1
3
32
1.20
18203--18262
2
30.0
2
100
0
120
50
0
0
50
1.00
19057--19121
24
2.7
24
90
0
103
12
13
53
20
1.71
19563--19683
45
2.7
45
89
0
179
33
21
19
25
1.96
19644--20203
74
7.5
74
93
1
922
35
21
17
26
1.95
19644--20203
150
3.7
148
94
1
931
35
21
17
26
1.95
27520--27557
14
2.6
15
87
4
51
71
13
2
13
1.26
30407--30445
16
2.3
16
91
8
60
48
0
0
51
1.00
30417--30453
16
2.2
16
90
4
56
43
0
2
54
1.14
30443--30750
140
2.2
142
88
6
462
46
7
7
39
1.59
30780--30841
25
2.8
24
81
15
71
62
1
3
32
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31124--31187
2
32.0
2
100
0
128
50
0
0
50
1.00
32357--32386
15
1.9
16
93
6
53
26
6
10
56
1.57
32058--32908
417
2.0
417
84
6
1107
43
7
9
39
1.65
32961--32993
16
2.0
17
88
5
50
27
6
12
54
1.60
33427--33534
21
5.2
21
74
6
94
29
43
5
21
1.75
33579--33641
21
3.0
21
71
0
54
28
39
11
20
1.87
40633--40842
65
3.2
64
79
9
221
26
19
24
30
1.98
41290--41322
2
16.5
2
100
0
66
51
0
0
48
1.00
41908--41951
21
2.1
21
82
0
52
36
15
38
9
1.80
43475--43569
21
4.4
21
77
9
86
25
18
27
28
1.98
43514--43569
22
2.7
20
84
13
69
26
16
28
28
1.97
49322--49501
65
2.8
63
80
9
159
27
18
24
30
1.98
49342--49551
65
3.3
63
79
12
196
26
18
24
31
1.97
51088--51167
2
40.0
2
100
0
160
50
0
0
50
1.00
59908--60018
44
2.5
43
78
5
107
36
11
23
28
1.90
63913--64833
312
3.0
311
89
1
1407
38
19
13
28
1.90
68264--68305
20
2.0
20
86
9
57
26
42
0
30
1.55

Tables:   1

The End!