Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009083.1 Hibiscus syriacus cultivar Beakdansim tig00112527_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84767

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22182--22217
19
1.9
19
88
5
56
66
5
25
2
1.27
29957--30011
8
6.5
8
76
12
56
69
0
0
30
0.89
29957--30020
25
2.5
26
77
10
69
67
0
1
31
1.00
29957--30020
26
2.5
25
82
10
67
67
0
1
31
1.00
29957--30037
42
1.9
42
82
9
103
66
2
1
29
1.12
30245--30664
206
2.0
210
95
4
771
34
16
6
42
1.73
40272--40448
32
5.5
32
78
9
182
31
15
12
40
1.85
40272--40441
64
2.7
64
84
3
218
30
15
13
40
1.86
46556--46697
31
4.6
31
87
6
198
16
31
26
24
1.97
46864--46896
4
8.5
4
86
6
50
3
21
0
75
0.93
58367--58401
2
17.5
2
100
0
70
51
0
0
48
1.00
58431--58474
18
2.4
18
81
14
54
63
2
2
31
1.19
63725--63804
31
2.6
32
80
9
78
48
5
3
42
1.42
63723--63804
30
2.7
30
80
1
83
47
6
3
42
1.45
66674--66723
3
16.7
3
100
0
100
0
68
0
32
0.90
68263--68303
21
1.9
22
95
5
75
36
9
26
26
1.88
73492--73559
33
2.1
33
88
0
100
33
14
20
30
1.93
73714--73793
37
2.2
37
84
4
99
26
18
15
40
1.90
73828--73963
36
3.8
35
77
9
125
33
20
10
36
1.87
74212--74278
26
2.5
26
85
4
80
29
11
11
46
1.77
76161--76230
29
2.4
30
81
11
83
18
8
8
64
1.47
79376--79437
25
2.5
26
84
10
85
20
9
0
69
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79392--79434
20
2.2
19
88
12
61
23
6
0
69
1.12

Tables:   1

The End!