Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009096.1 Hibiscus syriacus cultivar Beakdansim tig00112543_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48855

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--27
13
2.1
13
100
0
54
14
0
0
85
0.61
8946--9463
137
3.8
137
89
1
770
33
25
16
23
1.95
10156--10206
20
2.4
22
83
6
61
27
11
39
21
1.88
11084--11125
2
21.0
2
100
0
84
50
0
0
50
1.00
15736--15777
15
2.9
14
89
7
57
0
21
2
76
0.90
15736--15777
20
2.1
20
86
8
59
0
21
2
76
0.90
16235--16317
3
28.0
3
95
2
150
65
0
0
34
0.93
16574--16916
112
3.0
112
94
1
571
31
20
11
36
1.89
16827--17008
92
2.0
92
96
0
337
36
16
13
32
1.88
16919--17289
116
3.3
112
90
4
566
28
18
15
36
1.92
17998--18592
83
7.2
83
95
0
1048
35
22
13
27
1.92
19353--19389
16
2.3
16
90
9
58
54
10
8
27
1.63
19710--19777
5
12.6
5
74
13
55
2
14
0
82
0.79
19710--19777
16
4.2
16
83
3
91
2
14
0
82
0.79
19708--19782
7
10.6
7
73
15
57
2
16
0
81
0.80
19708--19779
28
2.7
26
85
12
101
2
15
0
81
0.79
30376--30482
52
2.1
52
84
10
139
67
2
5
24
1.26
31951--31992
15
2.9
14
89
7
57
0
21
2
76
0.90
31951--31992
20
2.1
20
86
8
59
0
21
2
76
0.90
32450--32550
3
34.3
3
94
4
179
65
0
0
34
0.93
40017--40190
54
3.2
53
85
7
226
31
23
20
24
1.98
40017--40191
55
3.2
54
86
3
237
31
24
20
24
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47822--47863
20
2.2
19
87
8
59
11
0
26
61
1.30

Tables:   1

The End!