Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009097.1 Hibiscus syriacus cultivar Beakdansim tig00112551_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56281

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1955--1992
2
19.0
2
100
0
76
50
0
0
50
1.00
6754--6814
23
2.5
24
86
5
79
39
0
3
57
1.15
7398--7449
27
1.9
27
84
0
68
30
7
21
40
1.81
7697--7766
27
2.5
28
75
11
72
38
8
7
45
1.62
7809--7861
2
27.0
2
96
3
99
49
0
0
50
1.00
17307--17351
23
2.0
23
86
8
65
64
0
2
33
1.06
21095--21132
20
1.9
20
88
0
58
26
26
5
42
1.76
24321--24460
60
2.3
60
79
3
149
30
18
7
43
1.77
43974--44032
29
2.0
29
86
0
82
28
23
16
30
1.97
44424--45256
212
4.0
209
85
6
1107
36
20
12
30
1.89
46589--46614
12
2.2
12
100
0
52
30
46
0
23
1.53
47262--47312
24
2.1
24
82
10
59
56
3
5
33
1.42
48096--48149
21
2.6
21
93
0
90
50
0
0
50
1.00
48113--48208
28
3.5
29
71
20
98
47
0
0
52
1.00
48182--48215
2
17.5
2
93
6
61
50
0
0
50
1.00
53249--53281
17
2.0
17
88
5
50
27
3
0
69
1.03
53541--53651
45
2.3
47
87
7
163
40
18
9
30
1.84

Tables:   1

The End!