Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009100.1 Hibiscus syriacus cultivar Beakdansim tig00112556_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  94155

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8655--8706
4
13.0
4
100
0
104
50
25
0
25
1.50
17715--17752
2
19.0
2
94
0
67
47
0
2
50
1.15
19130--19161
2
16.5
2
93
6
57
50
0
0
50
1.00
27250--27324
30
2.5
30
97
0
141
44
6
16
33
1.73
37633--37671
2
19.5
2
94
0
69
48
0
0
51
1.00
38199--38257
29
2.0
29
96
0
109
23
13
11
50
1.74
42805--42863
29
2.0
29
100
0
118
23
13
13
49
1.78
44815--44873
29
2.0
29
100
0
118
23
13
13
49
1.78
53511--53684
92
1.9
92
85
0
240
22
9
16
51
1.73
54436--54462
5
5.4
5
100
0
54
40
22
0
37
1.54
63255--63313
23
2.4
25
80
16
77
40
0
42
16
1.49
63270--63316
23
2.0
23
100
0
94
40
0
38
21
1.53
74475--74546
35
2.1
35
100
0
144
33
30
13
22
1.93
74591--74660
28
2.5
28
100
0
140
18
42
0
38
1.51
77109--77166
27
2.1
27
90
0
89
22
13
18
44
1.85
77176--77457
92
3.1
91
81
2
323
24
7
14
53
1.67
84677--84743
31
2.2
31
81
2
82
46
2
16
34
1.62
86857--86891
18
1.9
18
88
0
52
28
0
28
42
1.56
87177--87233
29
1.9
30
85
7
80
50
5
3
40
1.42
90411--90439
14
2.1
14
100
0
58
51
20
6
20
1.70

Tables:   1

The End!