Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009101.1 Hibiscus syriacus cultivar Beakdansim tig00112561_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62628

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3214--3255
21
2.0
21
85
0
57
64
0
0
35
0.94
3224--3266
21
2.0
21
86
0
59
60
2
0
37
1.10
8734--8805
35
2.1
35
100
0
144
33
30
13
22
1.93
8850--8919
28
2.5
28
100
0
140
18
42
0
38
1.51
11374--11431
27
2.1
27
90
0
89
22
13
18
44
1.85
11441--11723
92
3.1
90
81
3
323
24
7
14
53
1.66
19009--19075
31
2.2
31
81
2
82
46
2
16
34
1.62
21225--21259
18
1.9
18
88
0
52
28
0
28
42
1.56
21550--21609
31
1.9
32
86
3
86
53
5
3
38
1.39
24859--24889
14
2.2
14
100
0
62
51
19
6
22
1.69
37074--37098
12
2.1
12
100
0
50
52
16
8
24
1.70
40414--40453
3
13.3
3
100
0
80
67
0
0
32
0.91
40530--40560
6
5.2
6
100
0
62
48
35
0
16
1.46
41920--41963
21
2.1
21
95
0
79
38
22
6
31
1.81
48637--48793
78
2.0
77
93
1
269
21
10
20
47
1.80
49235--49344
56
2.0
56
98
0
211
25
16
28
30
1.97

Tables:   1

The End!