Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009103.1 Hibiscus syriacus cultivar Beakdansim tig00112568_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40790

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4583--4651
29
2.3
29
74
16
70
2
18
2
75
1.06
12505--12544
20
1.9
20
85
10
53
32
7
32
27
1.85
16781--16820
20
1.9
20
85
10
53
32
7
32
27
1.85
17032--17067
15
2.4
15
90
0
54
50
5
0
44
1.25
21054--21093
20
1.9
20
85
10
53
32
7
32
27
1.85
21305--21340
15
2.4
15
90
0
54
50
5
0
44
1.25
25326--25365
20
1.9
20
85
10
53
32
7
32
27
1.85
29591--29630
20
1.9
20
85
10
53
32
7
32
27
1.85
33839--33878
20
1.9
20
85
10
53
32
7
32
27
1.85
35276--35308
15
2.2
15
89
10
50
18
21
0
60
1.36

Tables:   1

The End!