Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009113.1 Hibiscus syriacus cultivar Beakdansim tig00112595_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55179

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2682--3530
184
4.6
185
95
2
1524
34
15
14
35
1.88
2682--3530
364
2.3
368
95
3
1527
34
15
14
35
1.88
4988--5074
3
29.0
3
77
0
84
24
34
5
35
1.79
4988--5089
18
5.7
18
79
0
87
22
34
6
36
1.81
4996--5086
42
2.2
42
91
0
146
21
35
7
35
1.83
6538--8557
199
10.1
199
97
0
3801
31
15
15
37
1.88
6538--8557
798
2.5
797
97
0
3830
31
15
15
37
1.88
10469--10534
33
2.0
33
87
0
96
24
45
1
28
1.62
12636--12688
24
2.2
24
83
6
63
26
7
13
52
1.66
12833--12879
20
2.4
19
79
10
58
19
17
8
55
1.67
13001--13046
20
2.3
20
85
10
67
15
17
13
54
1.71
35832--35919
32
2.8
32
98
0
167
45
3
21
29
1.68
38667--38726
30
2.0
30
93
0
102
15
21
16
46
1.83
39001--39069
22
2.7
27
78
21
103
50
4
7
37
1.50
39020--39084
22
2.9
22
93
2
103
50
3
9
36
1.50
39001--39084
22
3.5
23
85
9
98
50
3
8
38
1.50
42101--42148
21
2.3
21
88
0
78
27
16
12
43
1.84
46744--46791
21
2.3
21
96
0
87
27
18
12
41
1.86

Tables:   1

The End!