Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009114.1 Hibiscus syriacus cultivar Beakdansim tig00112597_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  101017

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20711--20798
32
2.8
32
98
0
167
45
3
21
29
1.68
23565--23624
30
2.0
30
93
0
102
15
21
16
46
1.83
23906--23995
26
3.5
26
95
3
155
51
3
7
37
1.48
27037--27084
21
2.3
21
88
0
78
27
16
12
43
1.84
31697--31744
21
2.3
21
96
0
87
27
18
12
41
1.86
50275--50315
3
14.3
3
80
19
52
31
0
0
68
0.90
50275--50315
17
2.4
18
92
8
68
31
0
0
68
0.90
53917--55160
420
3.0
419
93
1
2048
26
17
26
29
1.98
57085--57134
25
2.1
22
85
10
64
32
4
12
52
1.57
70677--70707
2
15.5
2
100
0
62
48
0
0
51
1.00
75830--75869
20
2.0
20
90
0
62
37
12
15
35
1.85
78075--78226
60
2.6
58
71
12
146
28
19
7
44
1.78
80744--80769
9
2.9
9
100
0
52
42
11
11
34
1.77
81021--81059
17
2.4
17
91
4
62
41
0
5
53
1.23
90919--91029
57
1.9
57
94
0
195
26
18
25
30
1.98

Tables:   1

The End!