Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009115.1 Hibiscus syriacus cultivar Beakdansim tig00112598_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58023

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4551--4587
18
2.0
19
89
5
58
24
13
0
62
1.31
7505--7533
12
2.4
12
100
0
58
27
27
17
27
1.97
7975--8033
18
3.3
18
78
7
75
83
0
15
1
0.74
7972--8033
25
2.5
25
80
15
74
82
0
16
1
0.75
7972--8033
11
6.1
10
74
22
58
82
0
16
1
0.75
9297--9522
115
2.0
114
93
2
391
32
17
21
28
1.96
10254--10545
113
2.6
114
86
3
396
36
14
18
30
1.91
10478--10619
74
1.9
74
85
1
196
36
16
14
33
1.88
10366--10764
187
2.1
184
83
4
498
37
13
17
31
1.89
10222--10873
299
2.2
295
93
1
1126
36
15
17
31
1.90
10551--11047
109
4.4
110
80
7
428
38
15
17
28
1.90
10843--11135
124
2.4
121
85
5
371
41
16
19
22
1.90
11277--11338
3
21.0
3
74
9
56
29
0
0
70
0.87
11271--11319
17
3.0
16
82
11
55
22
2
0
75
0.90
11271--11320
16
3.0
17
85
8
59
22
2
0
76
0.89
11279--11324
11
4.0
11
88
5
65
21
0
0
78
0.76
11279--11325
17
2.7
17
81
15
60
23
0
0
76
0.78
14540--14611
30
2.4
30
88
2
101
52
5
11
30
1.59
14593--14642
20
2.5
20
96
0
91
42
10
14
34
1.78
14971--15061
30
3.3
27
77
19
89
52
2
0
45
1.13
14971--15061
28
3.2
28
78
17
91
52
2
0
45
1.13
15099--15148
21
2.3
23
86
10
70
54
0
0
46
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20037--20065
2
14.5
2
100
0
58
51
0
0
48
1.00
32918--33003
3
28.7
3
92
0
145
33
2
1
62
1.15
34392--34438
20
2.3
21
75
10
53
25
4
8
61
1.43
34482--34527
25
2.0
24
83
12
60
43
0
0
56
0.99
35167--35218
18
2.9
17
73
18
52
26
0
1
71
0.97
35208--35244
15
2.7
15
88
12
53
27
5
5
62
1.39
46203--46247
18
2.6
17
89
6
65
31
6
8
53
1.58
46988--47592
84
7.2
84
97
1
1128
27
14
21
36
1.92
48294--48832
112
4.9
112
91
6
854
37
12
20
29
1.89
48293--48832
225
2.5
222
91
5
861
37
12
20
29
1.89
49147--49212
3
22.7
3
90
6
109
33
1
0
65
1.02
49147--49212
20
3.2
20
93
2
105
33
1
0
65
1.02
49146--49212
17
3.8
18
84
11
86
34
1
0
64
1.03
50588--50634
20
2.3
21
75
10
53
25
4
8
61
1.43
51877--51907
13
2.4
13
94
0
53
58
22
6
12
1.58

Tables:   1

The End!