Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009116.1 Hibiscus syriacus cultivar Beakdansim tig00112601_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56433

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1334--1380
16
2.9
16
93
0
85
29
27
0
42
1.56
2416--2483
26
2.6
26
92
0
109
17
33
20
27
1.95
10825--10858
17
2.0
17
88
0
50
20
23
5
50
1.70
13524--13584
13
5.0
12
75
20
56
29
1
37
31
1.67
17476--17544
33
2.1
33
83
5
86
33
1
34
30
1.67
17530--17590
13
5.0
12
75
20
56
27
3
37
31
1.73
17515--17591
36
2.2
35
88
2
109
27
3
35
33
1.75
17930--17980
19
2.6
20
87
3
68
45
5
15
33
1.71
19841--19880
20
1.9
20
85
10
53
32
7
32
27
1.85
21212--21241
13
2.4
13
94
5
53
26
30
0
43
1.55
25393--25432
20
1.9
20
85
10
53
32
7
32
27
1.85
28241--28283
23
1.9
21
81
13
50
32
18
13
34
1.90
50301--50351
21
2.6
20
87
9
70
29
13
9
47
1.75
54132--54183
21
2.6
21
90
6
81
32
13
7
46
1.72

Tables:   1

The End!