Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000912.1 Hibiscus syriacus cultivar Beakdansim tig00001815_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38322

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2395--2427
2
17.0
2
93
6
59
48
0
0
51
1.00
11839--11880
21
2.0
21
95
0
75
26
28
21
23
1.99
11916--11959
21
2.1
21
100
0
88
13
27
45
13
1.81
11985--12062
20
4.2
20
79
15
94
14
28
37
20
1.91
12007--12036
15
2.0
15
100
0
60
13
26
33
26
1.93
11987--12056
35
2.0
35
91
0
113
15
28
34
21
1.94
12370--12416
22
2.1
22
96
0
85
34
2
8
55
1.42
14392--14461
34
2.1
32
84
5
86
22
30
14
32
1.94
14745--14786
21
2.0
21
95
0
75
26
28
21
23
1.99
14823--14884
20
3.1
20
100
0
124
14
29
41
14
1.85
14910--14989
21
4.1
21
76
18
91
12
27
40
20
1.88
14933--14962
15
2.0
15
100
0
60
13
26
33
26
1.93
14912--14983
36
2.0
36
91
0
117
13
27
37
20
1.91
18708--18743
15
2.3
16
90
4
56
5
0
19
75
1.00
20143--20181
21
1.9
21
84
5
53
25
15
2
56
1.52
21391--21442
15
3.2
17
72
22
58
38
19
0
42
1.51
26194--26400
109
1.9
107
83
5
265
33
25
17
24
1.96
29163--29214
15
3.4
15
76
10
52
80
0
5
13
0.88
29165--29222
20
2.9
19
77
7
62
81
1
5
12
0.94
34172--34225
21
2.6
21
69
0
54
46
11
7
35
1.67
35590--35626
19
1.9
19
88
0
56
48
8
0
43
1.32
37479--37515
17
2.1
18
90
5
58
37
0
0
62
0.96

Tables:   1

The End!