Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009126.1 Hibiscus syriacus cultivar Beakdansim tig00112622_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86541

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1573--1634
29
2.1
29
94
5
108
46
3
16
33
1.63
2546--2625
27
2.8
29
79
9
92
16
30
32
21
1.95
9851--9912
26
2.4
26
100
0
124
40
6
9
43
1.63
20427--20479
27
2.0
27
81
7
63
26
1
7
64
1.31
20502--20546
16
2.7
18
76
16
51
22
6
8
62
1.48
21874--21942
30
2.3
30
94
0
120
10
5
59
24
1.52
21874--21975
36
3.0
36
82
10
101
9
7
57
24
1.57
21900--21988
36
2.4
39
75
9
105
8
7
59
23
1.54
21984--22022
18
2.2
18
85
0
51
10
7
56
25
1.59
22074--22131
30
1.9
30
82
0
71
15
6
56
20
1.62
22086--22135
24
2.1
24
84
0
64
12
8
56
24
1.62
22065--22149
36
2.4
36
81
0
89
14
4
55
25
1.58
22085--22141
30
1.9
30
85
0
78
14
7
54
24
1.64
22287--22353
15
4.5
15
76
0
62
16
2
65
14
1.39
22281--22507
12
19.5
12
67
8
58
13
4
58
22
1.54
22394--22494
18
5.4
18
69
6
58
12
2
57
26
1.50
22443--22580
24
6.0
24
68
17
69
8
3
56
31
1.47
22520--22575
12
4.7
12
78
8
51
3
5
55
35
1.40
22447--22580
18
7.4
18
73
0
79
8
3
55
31
1.48
22597--22661
30
2.2
30
85
0
85
13
4
55
26
1.58
22643--22743
42
2.4
42
94
0
184
11
9
54
23
1.67
26694--26825
51
2.6
51
75
10
137
41
9
8
40
1.67
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33177--33234
24
2.4
24
100
0
116
25
32
27
13
1.94
33526--33620
32
3.0
32
78
3
93
34
15
11
37
1.84
35999--36031
16
2.1
16
88
5
50
63
0
0
36
0.95
36454--36497
14
3.1
15
81
15
58
65
0
0
34
0.93
48056--48097
21
2.0
22
95
4
77
14
26
16
42
1.86
49279--49332
20
2.7
20
94
0
90
37
0
27
35
1.57
49494--49568
38
2.0
37
84
5
98
50
2
0
46
1.15
51208--51283
36
2.1
36
85
7
100
47
1
3
47
1.29
52122--52189
29
2.3
29
94
0
118
41
8
20
29
1.82
57254--57299
14
3.2
14
82
11
58
36
0
0
63
0.95
59676--60046
190
2.0
189
88
3
559
46
9
3
40
1.54
63161--63208
2
24.0
2
100
0
96
50
0
0
50
1.00
64081--64126
23
2.0
23
83
8
58
52
0
2
45
1.13
76001--76182
90
2.0
89
87
1
256
25
26
21
26
1.99
77427--77523
35
2.8
35
98
0
185
23
23
28
23
1.99

Tables:   1

The End!