Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009158.1 Hibiscus syriacus cultivar Beakdansim tig00112685_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61532

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10391--10428
20
1.9
20
88
0
58
26
36
26
10
1.89
23497--23545
18
2.6
19
78
12
57
69
0
14
16
1.19
25612--25654
22
2.0
22
95
0
77
37
39
2
20
1.66
27104--27134
15
2.1
15
100
0
62
29
19
6
45
1.75
31531--31610
35
2.3
35
97
0
151
36
15
8
40
1.78
37330--37367
14
2.7
14
88
8
51
0
18
0
81
0.69
37330--37367
19
2.0
19
90
10
60
0
18
0
81
0.69
37355--37442
27
3.3
27
87
3
124
7
13
14
63
1.51
37463--37492
12
2.5
12
94
0
51
16
26
10
46
1.78
41766--41804
20
2.0
20
89
0
60
33
23
10
33
1.88
44359--44403
18
2.5
18
96
0
81
26
22
11
40
1.87
49980--50039
30
2.0
31
83
3
77
26
8
10
55
1.61
50942--50992
20
2.6
20
90
3
77
35
15
5
43
1.71
51412--51448
18
2.1
18
90
10
58
24
10
0
64
1.25
54014--54048
15
2.3
15
100
0
70
20
28
25
25
1.99

Tables:   1

The End!