Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009161.1 Hibiscus syriacus cultivar Beakdansim tig00112689_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57013

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10284--10323
21
1.9
21
94
0
71
32
30
15
22
1.94
10401--10449
19
2.6
19
84
9
57
24
30
18
26
1.98
19641--20901
260
4.8
260
91
0
1905
31
15
17
35
1.91
19689--20901
519
2.3
520
92
0
1982
31
15
17
35
1.91
21091--21152
3
20.7
3
100
0
124
33
0
0
66
0.92
25084--25171
40
2.2
39
83
2
104
48
1
12
37
1.48
34199--34274
36
2.1
36
97
0
143
43
14
10
31
1.79
38752--38781
15
2.0
15
100
0
60
13
46
26
13
1.80
39203--39278
35
2.2
35
97
0
143
40
15
10
32
1.82
43752--43781
15
2.0
15
100
0
60
13
46
26
13
1.80
44202--44277
36
2.1
36
97
0
143
43
14
10
31
1.79
48746--48775
15
2.0
15
100
0
60
13
46
26
13
1.80
49195--49270
36
2.1
36
97
0
143
43
14
10
31
1.79
53421--53456
2
18.0
2
100
0
72
50
0
0
50
1.00
53930--53975
13
3.5
13
85
8
58
26
26
2
45
1.65

Tables:   1

The End!