Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009165.1 Hibiscus syriacus cultivar Beakdansim tig00112700_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53121

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4330--4354
13
1.9
13
100
0
50
0
28
0
72
0.86
5488--5532
13
3.5
13
87
6
74
66
0
26
6
1.16
11033--11241
83
2.5
83
86
4
271
29
15
19
35
1.93
11494--11582
38
2.3
38
92
0
142
32
15
22
29
1.95
15727--15850
60
2.0
61
95
3
223
26
16
8
48
1.74
28878--28923
13
3.5
14
80
14
62
67
0
26
6
1.15
34446--34659
83
2.6
82
85
3
277
29
15
19
34
1.93
34458--34684
83
2.7
83
82
6
221
28
14
20
35
1.93
34914--35006
42
2.3
40
85
7
118
32
15
22
30
1.94
36440--36494
22
2.5
22
100
0
110
16
21
12
49
1.79
39155--39278
61
2.0
61
95
3
223
27
16
8
48
1.74
44318--44350
14
2.4
14
100
0
66
24
30
18
27
1.98
50400--50432
14
2.4
14
100
0
66
24
30
18
27
1.98

Tables:   1

The End!