Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009166.1 Hibiscus syriacus cultivar Beakdansim tig00112701_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61725

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2698--2742
13
3.5
13
80
14
58
66
0
26
6
1.16
8250--8462
82
2.6
83
84
6
272
30
15
19
34
1.94
8262--8487
82
2.7
83
81
7
212
28
15
20
35
1.93
8717--8807
41
2.3
40
87
7
125
31
15
23
29
1.95
10244--10298
22
2.5
22
100
0
110
16
21
12
49
1.79
12967--13092
62
2.0
62
98
0
243
26
15
7
49
1.72
18192--18224
14
2.4
14
100
0
66
24
30
18
27
1.98
24354--24386
14
2.4
14
100
0
66
24
30
18
27
1.98
34418--34462
13
3.4
14
79
14
60
66
0
26
6
1.16
39997--40210
83
2.6
82
85
3
277
29
15
19
35
1.93
40463--40554
41
2.3
40
87
5
125
31
15
22
30
1.95
41993--42047
22
2.5
22
100
0
110
16
21
12
49
1.79
44722--44847
62
2.0
62
98
0
243
26
15
7
49
1.72
59193--59388
81
2.4
82
80
8
206
28
15
19
36
1.93
61151--61204
22
2.5
22
96
3
101
16
22
12
48
1.80

Tables:   1

The End!