Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009171.1 Hibiscus syriacus cultivar Beakdansim tig00112727_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53551

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7490--7573
43
2.0
43
85
2
116
35
8
21
34
1.84
11686--11745
3
19.7
3
90
10
95
0
31
0
68
0.90
11794--11825
15
2.1
16
94
5
57
6
21
0
71
1.07
11712--11864
82
1.8
84
90
2
247
22
21
3
52
1.61
13918--13955
17
2.3
17
86
4
51
55
0
0
44
0.99
14448--14596
46
3.5
43
72
20
141
21
23
14
40
1.89
14442--14603
83
2.0
83
91
4
265
22
22
12
41
1.88
15140--15207
22
3.1
22
97
0
127
39
14
14
30
1.87
15295--15411
57
2.1
56
88
6
175
31
21
8
38
1.83
23280--23439
65
2.5
65
86
5
209
28
18
23
30
1.97
23280--23487
65
3.2
62
76
13
188
26
18
24
30
1.98
26089--26170
23
3.6
22
78
8
94
24
24
26
24
2.00
26093--26186
44
2.1
44
83
11
113
25
21
25
27
1.99
32409--32490
23
3.6
22
78
8
94
24
26
24
24
2.00
37561--37615
27
2.0
27
100
0
110
45
7
7
40
1.60
41835--41873
21
1.9
20
94
5
69
33
10
25
30
1.89
41885--41920
18
2.0
18
100
0
72
22
16
0
61
1.35
43584--43609
12
2.2
12
100
0
52
34
0
7
57
1.27
43771--43824
14
4.1
14
75
20
53
53
0
1
44
1.11
43802--43829
14
2.0
14
100
0
56
64
0
7
28
1.20
46255--46283
14
2.1
14
100
0
58
20
6
0
72
1.07
46399--46449
25
2.0
25
100
0
102
56
7
0
35
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49487--49533
23
2.0
23
100
0
94
23
17
17
42
1.88
50749--50782
17
2.0
17
88
0
50
47
11
2
38
1.55
53471--53499
14
2.1
14
100
0
58
27
0
13
58
1.36

Tables:   1

The End!