Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009172.1 Hibiscus syriacus cultivar Beakdansim tig00112730_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21639

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
130--172
18
2.4
18
92
7
70
20
4
0
74
1.00
221--297
30
2.4
34
87
8
108
23
5
0
71
1.06
221--299
31
2.5
32
82
12
99
22
5
0
72
1.04
7618--8329
221
3.2
225
94
3
1204
44
7
8
39
1.63
8379--8423
20
2.3
19
88
11
72
55
11
15
17
1.68
8557--8601
20
2.3
19
81
11
63
51
11
17
20
1.75
8563--8608
20
2.5
19
82
10
60
50
10
15
23
1.75
10816--10859
21
2.1
21
91
0
70
40
11
31
15
1.83
10891--10956
33
2.0
33
90
0
105
28
0
48
22
1.51
12153--12177
4
6.2
4
100
0
50
24
0
28
48
1.52
12754--12802
19
2.6
19
90
0
71
30
2
12
55
1.48
12915--13886
198
4.9
199
94
1
1681
36
15
16
31
1.90
15345--15415
24
3.0
24
80
12
92
39
9
30
19
1.84
15357--15449
3
31.0
3
73
0
78
37
6
33
22
1.80
15353--15449
12
8.1
12
85
0
104
37
7
32
22
1.82
15342--15445
6
17.3
6
76
4
57
39
7
32
20
1.81
16623--16656
16
2.1
16
88
0
50
47
8
20
23
1.78
19789--19848
25
2.4
25
88
0
84
33
8
15
43
1.76
20194--20265
23
3.2
22
90
4
99
34
4
22
38
1.73
20539--20588
25
2.0
25
96
0
91
26
8
22
44
1.80
20965--21001
18
2.1
18
89
0
56
32
5
10
51
1.60
20957--21003
24
2.0
24
86
0
67
34
4
14
46
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21236--21319
36
2.2
37
91
6
134
48
21
13
16
1.80

Tables:   1

The End!