Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009182.1 Hibiscus syriacus cultivar Beakdansim tig00112753_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18290

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3641--3705
32
2.0
32
100
0
130
36
24
16
21
1.94
9322--9365
1
44.0
1
86
0
61
93
0
6
0
0.36
10300--10957
52
12.7
52
96
1
1218
23
15
23
37
1.93
10300--10957
103
6.4
104
96
1
1218
23
15
23
37
1.93
11516--12282
112
6.9
112
92
3
1216
37
14
19
28
1.91
11516--12282
222
3.5
224
93
2
1259
37
14
19
28
1.91
11512--12282
334
2.3
334
92
3
1290
37
14
19
28
1.91
12570--12642
3
24.3
3
83
10
96
35
0
0
64
0.94
12570--12649
31
2.8
28
75
19
76
37
0
0
62
0.95
13912--13949
19
2.1
19
95
5
69
26
0
5
68
1.11
13915--13956
19
2.2
19
87
8
59
28
0
4
66
1.12
14573--14610
20
1.9
20
100
0
76
39
21
15
23
1.92
17005--17088
12
6.8
12
73
15
55
72
2
10
14
1.21
16981--17098
23
4.9
23
72
14
85
73
1
11
12
1.17
17035--17103
27
2.6
27
76
15
72
72
4
11
11
1.25

Tables:   1

The End!