Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009190.1 Hibiscus syriacus cultivar Beakdansim tig00112763_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69896

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
687--720
14
2.4
14
85
0
50
73
0
0
26
0.83
7463--7615
28
5.5
28
73
17
115
39
22
6
30
1.80
7653--7701
18
2.8
17
90
6
80
14
22
44
18
1.85
11415--11498
28
2.9
28
79
16
91
20
17
9
52
1.72
15328--15369
21
2.0
21
90
0
66
57
2
7
33
1.39
19072--19128
24
2.6
21
74
15
60
29
22
19
28
1.98
19072--19169
45
2.2
44
84
12
121
29
23
19
27
1.98
21319--21461
65
2.2
65
96
0
259
36
26
16
20
1.94
24862--24946
20
4.0
20
70
22
66
14
24
35
25
1.93
38551--38585
11
3.3
11
88
8
54
40
8
34
17
1.80
39382--39418
10
3.4
11
88
11
58
27
0
0
72
0.84
39870--39937
31
2.2
30
80
14
77
35
1
0
63
1.04
39902--39939
14
2.7
14
87
0
58
34
0
0
65
0.93
40641--40712
17
4.2
16
81
12
81
38
13
8
38
1.75
41115--41194
25
3.2
25
94
0
142
35
22
17
25
1.95
44017--44072
16
3.4
16
80
11
69
46
1
0
51
1.11
44217--44267
24
2.1
23
82
13
59
60
0
0
39
0.97
44219--44275
26
2.1
28
80
9
73
57
0
0
42
0.98
45635--45733
3
33.0
3
85
0
126
59
0
1
39
1.04
46068--46622
112
4.9
114
91
2
847
27
19
14
38
1.91
47337--47975
83
7.7
83
96
1
1065
35
21
14
28
1.92
59792--59835
13
3.4
13
80
0
52
56
2
2
38
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59803--59856
21
2.4
23
73
17
60
61
1
1
35
1.18
60278--60333
16
3.4
16
80
11
69
46
1
0
51
1.11
60478--60528
24
2.1
23
82
13
59
60
0
0
39
0.97
60480--60536
26
2.1
28
80
9
73
57
0
0
42
0.98
61873--61947
3
25.0
3
81
10
82
60
0
0
40
0.97
61870--61947
24
3.0
27
87
7
110
58
0
0
41
0.98
64796--64834
20
2.0
20
90
10
62
43
0
2
53
1.14
67731--67788
20
2.7
20
81
10
62
25
22
22
29
1.99

Tables:   1

The End!