Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009193.1 Hibiscus syriacus cultivar Beakdansim tig00112775_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68296

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3561--3588
12
2.3
12
100
0
56
46
0
0
53
1.00
7278--7312
17
2.0
18
88
5
54
62
0
22
14
1.31
7523--7557
8
4.6
8
86
13
56
0
22
0
77
0.78
7517--7580
14
4.6
14
79
16
71
0
20
1
78
0.84
7516--7579
19
3.2
19
81
18
76
0
20
1
78
0.84
10352--10391
19
2.0
20
85
4
55
62
0
15
22
1.32
14638--14689
19
2.6
21
90
6
81
46
7
13
32
1.72
18624--18658
13
2.7
13
100
0
70
11
8
5
74
1.22
18650--18686
6
6.5
6
87
12
60
0
13
0
86
0.57
18650--18685
11
3.3
11
92
0
63
0
13
0
86
0.58
18654--18686
17
2.0
17
94
5
59
0
12
0
87
0.53
18650--18703
22
2.4
23
84
9
67
1
14
1
81
0.86
19409--19460
19
2.6
21
90
6
81
46
7
13
32
1.72
22934--22993
27
2.2
27
80
11
68
61
15
15
8
1.55
24030--24064
15
2.3
15
95
0
61
28
11
22
37
1.89
28871--28902
13
2.5
13
95
5
57
46
0
31
21
1.52
40800--40841
22
1.9
22
90
9
68
14
11
4
69
1.34
47258--47299
22
1.9
22
90
9
68
16
9
4
69
1.33
51183--51243
10
5.9
10
73
5
50
3
14
3
78
1.00
51185--51244
20
3.0
20
78
11
61
3
15
5
76
1.08
55422--55595
91
1.9
91
86
0
249
23
26
21
28
1.99
56375--56427
24
2.2
24
86
0
79
58
18
15
7
1.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56420--56448
15
2.0
15
93
6
51
75
3
20
0
0.94
59388--59561
91
1.9
91
90
0
276
21
26
21
29
1.99
66143--66214
21
3.6
20
90
5
110
34
13
4
47
1.63
66593--66661
33
2.1
33
83
5
86
31
1
36
30
1.67

Tables:   1

The End!