Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009196.1 Hibiscus syriacus cultivar Beakdansim tig00112778_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45454

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9834--9882
12
3.8
13
86
10
57
30
0
20
48
1.50
9840--9882
13
3.2
14
87
9
63
30
0
20
48
1.50
15271--15340
2
35.0
2
100
0
140
50
0
0
50
1.00
15403--15440
14
2.8
13
84
15
51
68
0
0
31
0.90
16767--16909
55
2.6
53
86
6
205
28
18
24
28
1.98
17456--17564
23
4.9
23
82
10
120
19
24
25
30
1.98
17434--17564
43
3.0
43
75
14
133
19
22
25
32
1.97
18427--18481
8
6.8
8
74
17
51
43
0
0
56
0.99
18429--18489
24
2.5
26
84
7
74
40
0
0
59
0.98
18449--18501
24
2.3
24
80
6
65
50
0
0
49
1.00
29355--29405
2
25.5
2
100
0
102
50
0
0
49
1.00
32791--32857
19
3.5
19
87
0
89
41
8
13
35
1.76
32942--32983
21
2.0
21
95
0
75
23
21
28
26
1.99
33012--33051
20
1.9
21
85
10
55
37
37
10
15
1.80
33263--33326
34
2.0
32
85
11
87
31
15
28
25
1.96

Tables:   1

The End!