Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000092.1 Hibiscus syriacus cultivar Beakdansim tig00000171_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66476

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7188--7255
31
2.2
31
86
0
91
48
17
16
17
1.81
8225--8264
20
2.0
20
100
0
80
45
20
15
20
1.86
17595--17623
7
4.3
7
95
4
51
0
10
0
89
0.48
19822--20208
59
6.6
59
88
2
566
32
11
19
35
1.88
19822--20208
118
3.3
118
91
1
627
32
11
19
35
1.88
20553--20857
68
4.5
68
87
0
385
31
17
23
27
1.96
20553--21285
136
5.5
136
78
5
751
30
16
23
29
1.96
20803--20912
55
2.0
55
85
0
148
33
17
22
26
1.96
20738--20980
123
2.0
123
87
0
351
31
17
22
27
1.97
20858--21285
68
6.3
68
82
2
464
30
15
23
30
1.95
20553--21238
204
3.4
194
80
6
696
31
16
23
29
1.96
20553--21184
327
1.9
326
81
1
764
31
16
23
28
1.96
21310--21426
45
2.6
46
93
2
200
47
5
22
24
1.71
25573--26076
59
8.6
59
89
2
764
33
10
19
36
1.86
26423--27100
68
10.0
68
84
3
830
29
14
24
31
1.95
27122--27269
45
3.2
46
80
2
172
47
5
20
27
1.72
27122--27267
46
3.2
45
80
8
134
47
5
19
26
1.71
30783--30855
21
3.4
21
83
14
103
21
10
26
41
1.86
30778--30866
44
2.0
44
93
0
151
23
11
26
38
1.89
43958--44010
19
2.7
19
94
2
88
49
5
11
33
1.62
62476--62726
93
2.7
92
81
8
267
35
19
10
34
1.86
62476--62760
94
3.0
93
80
7
247
35
18
10
35
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62769--63434
93
7.1
93
77
8
548
37
11
15
36
1.83
62796--63434
280
2.3
280
80
6
686
37
11
15
35
1.83
62926--63430
187
2.7
185
79
4
532
38
12
14
35
1.83
65850--65903
24
2.3
23
96
3
99
46
11
18
24
1.81

Tables:   1

The End!