Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009200.1 Hibiscus syriacus cultivar Beakdansim tig00112784_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41467

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5955--6140
93
2.0
94
89
6
288
17
18
18
45
1.86
6841--6871
2
15.5
2
100
0
62
51
0
0
48
1.00
12819--12852
16
2.1
16
94
0
59
32
8
26
32
1.87
18825--18906
29
2.8
29
92
1
128
32
14
10
41
1.81
23553--23629
29
2.7
29
93
0
127
32
15
11
40
1.84
28271--28578
51
6.1
50
73
13
190
27
10
54
8
1.62
28203--28426
33
6.9
33
87
9
268
25
10
56
7
1.60
28429--28611
33
5.5
33
85
5
262
26
11
52
9
1.67
28509--28597
15
5.5
15
70
15
70
24
16
51
6
1.69
28405--28633
68
3.4
67
85
6
284
28
10
51
9
1.66
31607--31750
38
4.1
34
72
19
100
43
3
10
42
1.55
31607--31683
33
2.2
37
84
11
99
40
5
11
42
1.64
31683--31761
38
2.1
38
88
4
115
49
2
8
39
1.48
31870--31923
24
2.3
23
78
15
56
20
7
1
70
1.21
33111--33149
16
2.4
17
87
12
55
15
12
5
66
1.41
33172--33218
23
2.1
23
84
7
62
17
14
2
65
1.36
33228--33264
15
2.4
16
90
4
58
29
2
0
67
1.04
33351--33378
6
4.7
6
100
0
56
46
0
0
53
1.00

Tables:   1

The End!