Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009202.1 Hibiscus syriacus cultivar Beakdansim tig00112787_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39662

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1798--1862
32
2.0
33
87
3
96
43
1
4
50
1.32
4935--5000
26
2.5
26
80
11
64
39
3
3
54
1.31
17302--17331
2
15.0
2
92
0
51
46
0
3
50
1.18
17740--17791
15
3.4
16
76
7
54
44
3
1
50
1.31
17740--17812
26
2.6
28
82
10
87
42
4
1
52
1.29
18658--18730
24
3.0
24
83
0
92
49
17
12
20
1.79
18662--18731
12
5.8
12
75
6
52
48
18
14
18
1.81
23360--23432
24
3.0
24
87
0
110
50
17
12
19
1.77
23364--23433
12
5.8
12
75
6
61
50
18
14
17
1.79
23362--23470
48
2.3
47
84
6
130
48
16
14
20
1.81
23363--23470
24
4.5
24
74
11
105
48
16
14
20
1.81
25896--25942
10
5.5
8
82
14
51
23
27
34
14
1.94
25906--25939
15
2.1
16
89
10
52
23
29
35
11
1.90
30807--30842
2
18.0
2
100
0
72
50
0
0
50
1.00
35656--35728
29
2.5
29
77
6
76
45
2
2
49
1.31
36129--36410
140
2.0
141
96
1
521
35
13
14
36
1.86

Tables:   1

The End!