Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000921.1 Hibiscus syriacus cultivar Beakdansim tig00001836_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61051

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
285--346
3
21.3
3
93
6
110
66
0
0
33
0.92
285--346
29
2.1
29
100
0
124
66
0
0
33
0.92
513--1086
134
4.3
134
80
6
560
30
15
21
32
1.94
492--1034
269
2.0
263
85
4
723
31
15
21
32
1.94
1391--1444
21
2.5
22
93
3
92
33
9
9
48
1.67
1476--1586
42
2.7
41
80
5
118
28
20
23
27
1.99
1516--2151
190
3.4
188
83
6
772
33
16
17
32
1.92
5142--5290
77
1.9
79
79
8
171
40
9
6
44
1.61
10761--10823
20
3.0
21
72
9
58
30
12
11
46
1.77
11084--11115
10
3.3
10
95
4
57
21
28
0
50
1.49
11295--11327
2
17.0
2
93
6
59
48
0
0
51
1.00
11377--11434
24
2.5
24
78
16
59
36
3
10
50
1.54
11494--11543
18
2.8
18
78
0
55
38
2
4
56
1.30
22392--22443
9
5.1
10
76
19
54
67
1
3
26
1.18
23826--23881
3
20.0
3
82
14
66
66
1
0
32
1.03
23826--23882
19
3.0
20
87
5
73
66
1
0
31
1.02
23805--23885
22
3.8
22
80
6
78
61
1
0
37
1.04
23827--23892
22
3.1
21
74
12
64
68
1
1
28
1.08
24146--24446
124
2.5
122
84
4
381
25
19
15
39
1.91
24359--25446
113
9.7
112
80
11
1189
30
18
13
37
1.89
24359--25477
451
2.5
448
91
3
1775
30
18
13
37
1.89
24359--25442
225
4.8
226
92
1
1731
30
18
13
37
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25875--25927
22
2.4
22
87
0
70
39
11
13
35
1.80
30832--30901
7
9.7
7
87
3
86
1
17
0
81
0.77
30840--30900
14
4.4
14
91
0
95
1
18
0
80
0.80
30831--30893
22
3.0
20
76
17
65
3
15
0
80
0.83
30840--30901
21
2.9
21
90
2
97
1
17
0
80
0.79
31193--31218
2
13.0
2
100
0
52
50
0
0
50
1.00
37893--38094
95
2.1
95
83
11
261
23
24
13
38
1.91
44102--44439
81
4.2
81
87
0
471
31
20
11
37
1.88

Tables:   1

The End!