Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009215.1 Hibiscus syriacus cultivar Beakdansim tig00112802_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57397

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1766--1836
35
2.0
36
86
2
99
43
23
0
32
1.54
2329--2402
35
2.1
35
87
0
103
35
1
21
41
1.62
4230--4254
12
2.1
12
100
0
50
20
0
0
80
0.72
8255--8280
3
8.7
3
100
0
52
34
0
0
65
0.93
8831--8886
2
28.0
2
100
0
112
50
0
0
50
1.00
9031--9060
2
15.0
2
100
0
60
0
50
0
50
1.00
15160--15202
22
1.9
23
85
4
61
46
18
2
32
1.62
20786--20811
13
2.0
13
100
0
52
30
30
23
15
1.95
29651--29680
8
3.8
8
90
0
51
50
10
0
40
1.36
29654--29684
14
2.2
14
94
0
53
51
9
0
38
1.35
30649--30678
14
2.1
14
100
0
60
46
0
0
53
1.00
34413--34444
16
1.9
17
93
6
57
37
6
21
34
1.79
35197--35228
15
2.1
16
94
5
57
50
18
25
6
1.70
44879--44937
31
1.9
31
92
0
100
42
16
15
25
1.88
47021--47082
29
2.1
30
85
11
83
56
0
3
40
1.15
47032--47088
29
2.0
29
82
6
71
57
1
3
36
1.26
48306--48340
18
1.9
18
94
0
61
20
8
14
57
1.63
48540--48573
18
1.9
17
88
5
50
14
20
32
32
1.93
48599--48663
28
2.3
28
97
0
121
26
24
27
21
1.99
48752--48804
26
2.0
26
100
0
106
62
11
0
26
1.29
53147--53210
33
1.9
33
100
0
128
26
14
28
31
1.95
55884--55926
23
1.9
22
86
13
61
51
16
2
30
1.57

Tables:   1

The End!