Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009217.1 Hibiscus syriacus cultivar Beakdansim tig00112805_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97350

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10999--11142
63
2.3
64
84
3
175
29
17
22
31
1.96
16455--16576
28
4.4
28
88
1
165
36
11
11
40
1.77
16455--16592
28
5.1
27
83
6
120
33
11
13
42
1.80
17411--17451
22
2.0
21
90
9
66
48
4
0
46
1.23
17932--18029
37
2.6
37
96
0
178
23
10
30
35
1.88
22238--22288
19
2.7
19
90
0
75
19
25
29
25
1.99
22238--22286
9
5.1
10
78
9
57
20
22
30
26
1.98
22282--22322
17
2.4
17
95
0
73
19
43
21
14
1.87
22312--22355
7
6.4
7
89
5
63
20
29
25
25
1.99
22312--22349
20
1.9
20
94
0
67
18
31
26
23
1.97
29530--29618
19
4.6
19
87
4
74
19
23
30
26
1.98
29530--29617
10
9.1
10
74
7
83
19
22
30
27
1.98
29548--29619
19
3.8
19
89
5
110
18
26
30
25
1.98
29530--29619
38
2.3
38
84
5
110
18
24
30
26
1.98
29613--29670
17
3.4
17
95
0
98
15
43
24
17
1.87
29662--29696
7
5.1
7
86
6
54
17
31
25
25
1.97
31380--31424
21
2.1
21
87
0
63
28
24
17
28
1.97
39834--39877
21
2.1
21
100
0
88
29
29
4
36
1.77
42242--42299
30
2.0
29
83
10
73
60
5
6
27
1.44
43115--43308
55
3.6
55
83
5
225
27
17
15
39
1.90
65027--65074
20
2.4
21
86
10
66
31
0
25
43
1.55
66146--66179
2
17.0
2
100
0
68
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74024--74058
12
3.0
12
87
4
54
65
8
14
11
1.46
76251--76294
23
2.0
21
82
8
52
50
2
34
13
1.55
76625--76674
21
2.4
21
96
0
91
6
36
10
48
1.61
81817--81861
21
2.1
21
100
0
90
4
37
8
48
1.55
87808--87859
23
2.3
22
87
6
77
21
28
25
25
1.99
87820--87863
23
1.9
23
100
0
88
20
27
27
25
1.99
91533--91572
20
2.0
21
85
5
55
25
17
10
47
1.78

Tables:   1

The End!