Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009223.1 Hibiscus syriacus cultivar Beakdansim tig00112815_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53976

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
856--955
34
2.9
33
85
5
103
29
5
36
30
1.79
5201--5269
33
2.1
33
83
5
86
31
1
36
30
1.67
5255--5351
13
8.0
12
72
22
62
28
3
37
30
1.73
5240--5352
36
3.2
36
92
1
174
27
3
36
32
1.74
8889--8918
13
2.4
13
94
5
53
26
30
0
43
1.55
11269--11307
14
2.8
14
100
0
78
74
5
15
5
1.17
11252--11277
9
2.9
9
100
0
52
80
0
19
0
0.71
11269--11315
14
3.4
14
94
2
69
76
4
14
4
1.09
14691--14720
13
2.4
13
94
5
53
26
30
0
43
1.55
21275--21318
18
2.4
18
100
0
88
18
13
36
31
1.90
26348--26408
22
2.6
23
82
7
79
27
4
36
31
1.78
26368--26436
36
1.9
38
100
0
110
28
4
34
31
1.77
32061--32146
13
7.2
12
72
22
58
29
3
37
30
1.74
32043--32147
36
2.9
36
94
1
176
27
4
37
30
1.77
33933--33962
15
2.1
15
93
6
53
0
20
3
76
0.92
33957--34014
29
2.1
26
84
9
71
13
15
10
60
1.59
33955--34017
27
2.2
28
81
13
76
12
17
9
60
1.58
38017--38042
5
5.2
5
100
0
52
0
19
0
80
0.71
47443--47485
23
1.9
21
81
13
50
32
18
13
34
1.90
50224--50285
30
2.0
31
84
3
81
27
9
8
54
1.61
52251--52293
23
1.9
21
81
13
50
34
13
18
32
1.90

Tables:   1

The End!