Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009230.1 Hibiscus syriacus cultivar Beakdansim tig00112836_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58983

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2837--2898
22
2.8
21
76
9
61
32
8
19
40
1.81
8744--8785
22
1.9
22
85
0
57
30
9
21
38
1.85
16986--17023
17
2.3
17
90
4
60
47
5
2
44
1.39
17642--17770
68
1.9
67
85
7
181
19
16
7
56
1.64
20424--20466
20
2.2
20
100
0
86
23
0
48
27
1.51
22431--22977
273
2.0
271
91
2
873
30
22
21
26
1.98
26333--26375
21
2.0
21
86
0
59
34
4
13
46
1.65
32640--32695
22
2.5
22
97
2
103
51
0
10
37
1.37
45959--46042
15
5.2
16
76
16
75
76
0
14
9
1.02
45959--46019
7
8.1
7
75
13
50
75
0
14
9
1.04
45959--46034
8
10.4
8
70
29
55
76
0
13
10
1.02
45993--46036
19
2.4
19
88
11
65
79
0
11
9
0.93
46913--47262
136
2.6
136
92
0
558
35
18
21
24
1.95
47178--47919
331
2.2
332
87
3
1059
37
15
21
25
1.93
47512--47677
90
1.8
92
90
5
275
41
13
20
24
1.88
48046--48078
14
2.4
14
100
0
66
42
0
0
57
0.98
51629--51701
34
2.1
35
92
2
121
38
0
15
46
1.46
53651--53709
2
30.0
2
96
3
111
50
0
0
49
1.00
53767--53796
2
15.0
2
100
0
60
50
0
0
50
1.00
54868--54915
2
24.5
2
87
4
71
0
54
0
45
0.99
55773--56115
158
2.2
159
88
2
530
28
16
7
47
1.74

Tables:   1

The End!