Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009231.1 Hibiscus syriacus cultivar Beakdansim tig00112838_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45408

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9501--9563
7
9.1
7
78
16
60
76
0
14
9
1.02
9521--9570
19
2.7
19
90
3
75
78
0
14
8
0.97
9514--9588
26
2.8
27
82
9
84
76
0
16
8
1.02
9501--9563
8
8.0
8
74
19
53
76
0
14
9
1.02
9524--9583
19
3.2
19
86
9
70
76
0
15
8
1.00
9501--9577
33
2.3
34
84
11
104
76
0
12
10
1.02
10457--10806
136
2.6
136
92
0
558
35
18
21
24
1.95
11056--11222
91
1.8
92
90
3
275
41
13
20
23
1.88
10726--11427
332
2.1
331
88
2
1057
37
16
20
25
1.93
11593--11644
14
3.6
14
92
2
77
40
0
1
57
1.10
13271--13319
24
2.0
25
84
7
66
24
6
10
59
1.53
15204--15278
35
2.1
36
92
2
125
37
0
14
48
1.45
17257--17312
2
28.0
2
100
0
112
50
0
0
50
1.00
17369--17396
2
14.0
2
100
0
56
50
0
0
50
1.00
18480--18532
2
26.5
2
88
0
79
0
54
0
45
0.99
19410--19753
158
2.2
159
88
2
530
28
17
7
47
1.74
22896--22960
28
2.3
29
89
2
96
23
7
10
58
1.57
22943--22987
22
2.0
22
82
0
54
26
4
6
62
1.39
22987--23023
11
3.5
11
82
14
51
43
0
13
43
1.44
25416--25457
3
13.7
3
95
5
75
33
0
30
35
1.58
25656--25993
68
5.0
68
85
5
465
28
12
10
47
1.74
25705--25897
37
5.6
36
65
19
115
28
11
12
47
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25678--25846
31
5.1
31
66
20
99
27
11
11
49
1.74
26072--26135
32
2.0
32
96
0
119
25
7
18
48
1.75
27476--27525
20
2.5
20
93
0
82
22
20
10
48
1.79
30180--30515
121
2.8
121
92
0
528
22
15
26
35
1.94
30696--30774
34
2.3
34
100
0
158
21
15
27
35
1.93
35795--35845
16
3.2
16
75
2
50
58
9
7
23
1.56
41744--41778
2
17.5
2
100
0
70
48
0
0
51
1.00
43442--43514
31
2.4
29
82
11
83
32
12
26
28
1.92
43476--43519
19
2.4
19
92
3
72
36
18
22
22
1.95

Tables:   1

The End!