Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009240.1 Hibiscus syriacus cultivar Beakdansim tig00112867_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51096

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3131--3192
31
2.0
31
93
0
106
29
25
9
35
1.88
4426--4473
20
2.4
20
100
0
96
52
14
0
33
1.42
7020--7080
22
2.7
22
79
2
68
39
21
16
22
1.92
7119--7153
13
2.7
13
86
13
54
25
17
25
31
1.97
15135--15178
23
1.9
23
95
0
79
18
45
20
15
1.85
15137--15197
23
2.7
23
82
5
61
16
50
21
11
1.76
17559--17603
22
2.0
22
95
0
81
24
15
22
37
1.93
19755--19788
18
1.9
18
88
5
52
14
26
29
29
1.95
22141--22185
22
2.0
22
95
0
81
24
15
22
37
1.93
31572--31612
2
21.0
2
85
5
57
48
0
4
46
1.23
34214--34254
20
2.0
21
85
4
57
58
2
2
36
1.24
35655--35776
3
40.7
3
93
0
208
63
0
2
34
1.08
36096--36986
113
7.9
113
88
4
1289
30
19
12
37
1.89
37605--38035
83
5.2
83
97
1
785
36
21
14
27
1.93
37605--38035
167
2.6
167
97
1
796
36
21
14
27
1.93
39154--39212
11
5.4
10
76
15
55
3
16
0
79
0.86
39166--39214
26
1.9
25
84
12
64
4
16
0
79
0.88
49522--49558
15
2.7
15
88
12
53
62
8
5
24
1.44
50354--50396
21
2.0
23
86
9
63
67
6
0
25
1.15

Tables:   1

The End!