Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009241.1 Hibiscus syriacus cultivar Beakdansim tig00112871_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57761

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6242--6796
277
2.0
277
100
0
1110
25
16
20
37
1.93
17702--17752
19
2.7
19
81
0
66
58
1
0
39
1.09
25472--25503
2
16.0
2
100
0
64
50
0
0
50
1.00
26911--27076
83
2.0
83
90
0
260
31
18
13
35
1.90
32674--32711
16
2.4
16
82
4
51
63
0
5
31
1.17
33400--33475
36
2.1
37
87
7
111
30
13
15
40
1.86
33942--34565
109
5.9
108
82
6
562
22
19
25
32
1.97
34092--34565
109
4.4
108
86
3
564
21
19
25
33
1.97
35179--35263
36
2.4
36
79
0
89
37
12
22
27
1.91
35177--35552
103
3.7
103
93
1
623
37
12
20
29
1.90
35177--35552
205
1.8
204
92
0
635
37
12
20
29
1.90
37039--37072
18
1.9
18
88
5
52
2
8
8
79
1.03
37057--37104
23
2.2
23
85
7
64
0
14
6
79
0.92
37049--37106
22
2.7
21
79
10
64
1
13
6
77
1.05
40429--40462
16
2.1
16
88
0
50
61
0
5
32
1.20
40557--40589
14
2.3
15
89
5
50
72
6
0
21
1.05
41126--41227
36
2.7
38
85
7
129
31
15
14
38
1.88
48421--48533
20
5.7
20
91
0
181
42
20
18
18
1.89
48520--48586
20
3.3
20
95
0
116
31
26
19
22
1.98

Tables:   1

The End!