Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009242.1 Hibiscus syriacus cultivar Beakdansim tig00112873_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55318

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
372--635
73
3.6
73
78
11
263
41
10
14
33
1.79
325--656
146
2.2
148
82
6
406
40
11
13
34
1.81
325--655
75
4.5
75
77
7
309
40
11
13
33
1.81
630--692
21
2.8
23
83
9
85
36
14
15
33
1.88
749--796
23
2.1
23
92
3
80
39
18
10
31
1.85
749--1032
115
2.4
120
84
4
391
40
14
11
33
1.83
565--1009
212
2.1
217
85
4
591
40
13
13
33
1.83
968--1055
23
3.8
23
89
0
140
36
19
11
32
1.87
3158--3195
20
1.9
20
88
0
58
21
26
10
42
1.85
10240--10303
29
2.2
29
88
0
92
54
1
6
37
1.35
16999--17027
2
14.5
2
100
0
58
48
0
0
51
1.00
19180--19318
69
2.0
69
97
0
260
28
25
18
27
1.98
20626--20866
41
6.0
41
80
7
208
46
16
17
20
1.84
20722--20832
34
3.1
34
75
16
123
46
16
18
18
1.84
20641--20866
116
1.9
117
84
0
301
46
15
17
19
1.84
20682--20832
75
2.0
75
93
0
257
46
15
19
19
1.84
40543--40726
56
3.3
56
84
1
217
39
16
15
28
1.89
42245--42270
3
8.7
3
100
0
52
65
0
34
0
0.93
49449--49602
51
3.1
51
80
5
161
18
34
12
34
1.89
54821--54885
31
2.1
30
91
2
103
21
16
7
53
1.68
55214--55250
18
2.1
18
89
0
56
32
5
10
51
1.60
55206--55252
24
2.0
24
86
0
67
34
4
14
46
1.64

Tables:   1

The End!