Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009243.1 Hibiscus syriacus cultivar Beakdansim tig00112877_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70327

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10967--11031
28
2.3
28
97
0
121
32
18
4
44
1.70
12718--12762
23
2.0
23
90
0
72
60
15
13
11
1.60
18849--18874
13
2.0
13
100
0
52
15
23
23
38
1.92
19610--19636
12
2.2
12
100
0
54
92
0
7
0
0.38
31832--31885
28
2.0
27
82
10
65
9
20
3
66
1.35
31851--31900
21
2.4
21
86
10
75
6
14
2
78
1.03
31924--31949
13
2.0
13
100
0
52
0
23
0
76
0.78
38165--38205
14
2.9
14
92
0
64
19
41
9
29
1.83
41747--41796
22
2.2
22
82
7
55
46
0
0
54
1.00
41538--41783
131
1.9
130
78
6
273
44
6
2
46
1.43
41808--41859
22
2.5
20
82
14
54
40
0
1
57
1.10
49638--49711
20
3.6
20
88
3
103
32
17
18
31
1.95
57328--57367
11
3.6
11
90
9
64
0
12
10
77
0.99
60294--60390
44
2.2
44
88
3
142
30
19
16
32
1.94
62287--62356
18
4.0
17
80
9
79
38
8
14
38
1.77
62287--62356
35
2.0
35
86
5
97
38
8
14
38
1.77
63520--63565
21
2.2
21
96
0
83
15
21
2
60
1.45
65883--65929
18
2.7
17
83
6
67
40
6
10
42
1.65
67973--67999
14
1.9
14
100
0
54
14
0
0
85
0.61
69493--69582
33
2.7
33
89
0
135
26
16
26
30
1.97

Tables:   1

The End!