Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000925.1 Hibiscus syriacus cultivar Beakdansim tig00001847_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60235

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16886--17000
45
2.5
45
88
1
176
29
18
9
42
1.82
17026--17638
81
7.6
81
87
1
874
30
22
11
35
1.89
24288--24441
39
3.9
39
82
0
164
32
23
26
17
1.97
24288--24443
78
2.0
78
83
2
197
32
23
26
17
1.96
30001--30156
39
4.1
38
76
6
136
36
19
24
19
1.95
30067--30156
36
2.4
36
85
5
117
36
21
25
16
1.94
31917--32078
82
2.0
82
88
2
245
34
14
34
16
1.89
46546--46688
45
3.2
45
88
5
209
41
13
20
23
1.89
51938--52264
45
7.2
44
86
4
411
42
13
19
24
1.87
51937--52264
135
2.4
135
88
2
469
42
13
19
24
1.87
53958--54148
66
2.9
65
86
3
195
42
9
27
19
1.82
53958--54267
112
2.8
112
89
4
465
44
9
25
20
1.82
53903--54082
46
3.9
46
89
1
281
43
9
26
20
1.82
54070--54214
46
3.2
46
93
1
247
44
10
25
20
1.83
53932--54255
92
3.7
90
75
18
274
43
10
26
20
1.83
54408--54558
54
2.8
56
80
9
184
35
9
16
37
1.82
54725--54929
81
2.5
81
84
1
277
36
12
22
27
1.91
56855--56889
3
11.7
3
100
0
70
31
0
0
68
0.90

Tables:   1

The End!