Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009255.1 Hibiscus syriacus cultivar Beakdansim tig00112903_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84075

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
787--916
41
3.2
41
85
2
181
45
12
22
20
1.84
11902--11973
18
4.0
18
96
0
135
51
5
9
33
1.58
20311--20346
18
2.0
18
94
0
63
52
5
11
30
1.59
24611--24640
4
7.5
4
92
0
51
73
0
3
23
0.98
29039--29073
17
2.0
18
88
5
54
28
5
11
54
1.59
29266--29302
2
18.5
2
88
0
56
0
5
48
45
1.25
29756--29829
38
1.9
38
88
0
112
39
12
12
36
1.80
36175--36205
15
2.1
15
93
0
53
41
6
12
38
1.69
40189--40232
20
2.2
20
84
4
63
20
31
25
22
1.98
46227--46440
117
1.8
119
84
4
299
50
5
16
28
1.67
47477--47507
16
1.9
16
93
0
53
51
9
12
25
1.70
54649--54690
15
2.9
15
85
3
50
71
2
7
19
1.20
66342--66367
12
2.2
12
100
0
52
15
7
7
69
1.35
67078--67280
98
2.1
97
82
7
241
33
17
18
31
1.94
67247--67290
13
3.4
13
93
0
70
34
18
18
29
1.94
73116--73158
18
2.3
19
92
4
70
67
0
4
27
1.10
75202--75531
46
7.2
46
92
0
536
33
21
6
37
1.80
75622--75736
61
1.9
61
87
0
167
29
27
18
24
1.98
77600--77646
13
3.8
13
81
16
64
14
19
48
17
1.81
77662--77713
10
5.3
10
80
11
63
36
26
21
15
1.93

Tables:   1

The End!