Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009257.1 Hibiscus syriacus cultivar Beakdansim tig00112905_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57802

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
239--394
82
1.9
82
97
0
294
30
21
13
34
1.92
2426--2526
32
3.1
33
90
4
161
48
10
0
40
1.38
2654--2687
14
2.3
15
90
5
52
0
35
0
64
0.94
3309--3413
21
5.2
20
69
21
67
34
11
13
40
1.80
3357--3386
15
2.0
15
100
0
60
20
13
13
53
1.72
3733--3793
27
2.2
27
75
18
63
22
19
1
55
1.52
9588--9643
28
2.0
28
100
0
112
35
17
25
21
1.95
12489--12517
12
2.3
13
94
5
51
10
17
6
65
1.44
18197--18355
44
3.6
45
79
8
166
29
20
14
35
1.92
31107--31486
192
2.0
192
99
0
751
42
17
13
26
1.86
35504--35807
54
5.5
53
79
8
180
26
22
25
25
2.00
35565--35804
112
2.2
109
88
3
347
25
22
26
25
2.00
35923--36080
81
2.0
81
93
0
271
31
22
31
15
1.95
52842--52886
23
2.0
23
86
0
63
35
0
13
51
1.41
53330--53370
15
2.7
15
100
0
82
41
12
21
24
1.87
57254--57301
24
1.9
26
87
8
73
27
18
14
39
1.90

Tables:   1

The End!