Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009258.1 Hibiscus syriacus cultivar Beakdansim tig00112907_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77151

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5234--5268
17
2.1
17
88
0
52
25
28
34
11
1.91
14770--14808
21
1.9
20
84
5
51
28
17
20
33
1.96
24697--24859
87
1.9
87
85
5
231
56
7
3
31
1.46
24616--24859
29
8.5
28
78
8
177
55
6
4
32
1.48
24616--24860
58
4.2
58
78
6
219
55
6
4
32
1.48
34277--34319
23
1.9
22
90
4
68
65
11
11
11
1.49
48112--48226
51
2.2
51
85
1
149
44
14
18
22
1.86
59713--59841
49
2.5
50
86
6
161
33
15
17
33
1.92
64595--64628
16
2.1
16
89
10
52
32
5
0
61
1.20
71633--71719
30
2.9
29
77
11
104
75
0
21
2
0.91
72385--72424
19
2.1
19
95
0
71
77
0
17
5
0.94
72457--72502
23
2.0
24
86
4
67
69
4
21
4
1.24
73106--73550
53
8.6
53
71
13
209
32
13
21
33
1.92
73180--73550
155
2.4
153
81
9
420
32
12
22
32
1.92

Tables:   1

The End!